Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Mir8102-201ENSMUST00000184148 139 ntBASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Gm16372-201ENSMUST00000073088 450 ntBASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.27□□□□□ -0.76
Trav12d-1A0N8R0 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Gm15321-201ENSMUST00000121290 288 ntBASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Gm14719-201ENSMUST00000121891 340 ntBASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Gm19220-201ENSMUST00000222682 803 ntBASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav12d-1A0N8R0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Gm14921-201ENSMUST00000118643 908 ntBASIC10.26□□□□□ -0.77
Trav12d-1A0N8R0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms