Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Auts2-212ENSMUST00000178555 309 ntBASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Gm27701-201ENSMUST00000184498 110 ntBASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Gm2495-201ENSMUST00000191160 466 ntBASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc194A0A140LIT1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc194A0A140LIT1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gm11618-201ENSMUST00000117946 267 ntBASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gm13813-201ENSMUST00000120998 787 ntBASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gm18018-201ENSMUST00000198273 408 ntBASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc194A0A140LIT1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Gm12291-201ENSMUST00000121627 311 ntBASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc194A0A140LIT1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms