Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Gm12341-201ENSMUST00000119724 503 ntBASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Gm26035-201ENSMUST00000083065 308 ntBASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Gm19184-201ENSMUST00000196798 928 ntBASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trbv29A0A0G2LB96 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Daam2-202ENSMUST00000224595 1926 ntBASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.59□□□□□ -0.71
Trbv29A0A0G2LB96 Gm44872-201ENSMUST00000207864 420 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms