Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atg4a-psA0A0G2JFS9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.5■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm37424-201ENSMUST00000191727 561 ntBASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm24548-201ENSMUST00000158650 108 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm16379-201ENSMUST00000161469 348 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm8762-201ENSMUST00000193486 339 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atg4a-psA0A0G2JFS9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms