Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm10305-201ENSMUST00000195331 2475 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm12203-201ENSMUST00000118235 598 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm13369-201ENSMUST00000119442 987 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm12209-201ENSMUST00000120089 596 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm15806-201ENSMUST00000120696 955 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm13123-201ENSMUST00000122173 492 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm9002-201ENSMUST00000178437 499 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm27839-201ENSMUST00000184242 106 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm37922-201ENSMUST00000195596 455 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm7653-201ENSMUST00000214567 508 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm17794-201ENSMUST00000220252 955 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm8213-201ENSMUST00000118191 441 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms