Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav13-4-dv7A0A075B6C2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Trav13-4-dv7A0A075B6C2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trav13-4-dv7A0A075B6C2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav13-4-dv7A0A075B6C2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav13-4-dv7A0A075B6C2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav13-4-dv7A0A075B6C2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav13-4-dv7A0A075B6C2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm23935-201ENSMUST00000102303 57 ntBASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm24270-201ENSMUST00000102326 57 ntBASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm24245-201ENSMUST00000157318 57 ntBASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm42550-201ENSMUST00000201553 960 ntBASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC8.82□□□□□ -1
Trav13-4-dv7A0A075B6C2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm43061-201ENSMUST00000198850 2241 ntBASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm11400-201ENSMUST00000120853 1214 ntBASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm15376-201ENSMUST00000122258 783 ntBASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Gm20445-201ENSMUST00000061905 565 ntBASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav13-4-dv7A0A075B6C2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms