Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Gm22121-201ENSMUST00000175148 54 ntBASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.79□□□□□ -0.36
H2afb2S4R1M3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Gm4768-201ENSMUST00000206199 686 ntBASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb2S4R1M3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.78□□□□□ -0.36
H2afb2S4R1M3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Gm19163-201ENSMUST00000223313 780 ntBASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms