Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Gm6447-201ENSMUST00000118905 835 ntBASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Gm12485-201ENSMUST00000119641 291 ntBASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Gm7063-201ENSMUST00000186840 981 ntBASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Gm43703-201ENSMUST00000200523 763 ntBASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ap4s1Q9WVL1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Gm25911-201ENSMUST00000157621 56 ntBASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Gm25144-201ENSMUST00000179561 110 ntBASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Gm25352-201ENSMUST00000179815 110 ntBASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Gm29608-201ENSMUST00000190444 463 ntBASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Map1b-203ENSMUST00000223725 2669 ntBASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ap4s1Q9WVL1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms