Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf13bQ9WU72 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm15808-201ENSMUST00000119046 604 ntBASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm13570-201ENSMUST00000140763 309 ntBASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm8885-201ENSMUST00000189382 598 ntBASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf13bQ9WU72 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf13bQ9WU72 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsf13bQ9WU72 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms