Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Gm6458-201ENSMUST00000211573 635 ntBASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Prpf40aQ9R1C7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Gm2231-201ENSMUST00000125661 612 ntBASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Gm27331-201ENSMUST00000183705 60 ntBASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Gm28693-202ENSMUST00000190758 331 ntBASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf40aQ9R1C7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm12106-201ENSMUST00000116006 1200 ntBASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm15824-201ENSMUST00000119516 955 ntBASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm13123-201ENSMUST00000122173 492 ntBASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm29705-201ENSMUST00000212598 474 ntBASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms