Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clcn2Q9R0A1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clcn2Q9R0A1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clcn2Q9R0A1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clcn2Q9R0A1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Clcn2Q9R0A1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clcn2Q9R0A1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Gm8652-201ENSMUST00000181363 964 ntBASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Gm8602-201ENSMUST00000184045 607 ntBASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Gm8598-201ENSMUST00000221184 836 ntBASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Clcn2Q9R0A1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm11814-201ENSMUST00000119515 929 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm24196-201ENSMUST00000179161 110 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm18187-201ENSMUST00000196476 984 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm7561-201ENSMUST00000211203 886 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcn2Q9R0A1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcn2Q9R0A1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcn2Q9R0A1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Clcn2Q9R0A1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcn2Q9R0A1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Clcn2Q9R0A1 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Clcn2Q9R0A1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Clcn2Q9R0A1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcn2Q9R0A1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcn2Q9R0A1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcn2Q9R0A1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcn2Q9R0A1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms