Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm14193-201ENSMUST00000105067 153 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm15207-201ENSMUST00000119259 442 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm11979-201ENSMUST00000119629 743 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm12783-201ENSMUST00000121425 397 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm5340-201ENSMUST00000203733 880 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm35713-201ENSMUST00000210516 199 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Gm25766-201ENSMUST00000104101 131 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Gm8723-201ENSMUST00000166076 820 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Gm8701-201ENSMUST00000169259 874 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Gm17931-201ENSMUST00000208132 634 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a4Q9QZR9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm13019-201ENSMUST00000120000 276 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm24398-201ENSMUST00000157870 109 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm5298-201ENSMUST00000201122 892 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.46□□□□□ -0.41
Col4a4Q9QZR9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms