Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prg4Q9JM99 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Prg4Q9JM99 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prg4Q9JM99 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prg4Q9JM99 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm13342-201ENSMUST00000121055 207 ntBASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm44405-201ENSMUST00000198952 126 ntBASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.68□□□□□ -0.54
Prg4Q9JM99 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.68□□□□□ -0.54
Prg4Q9JM99 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Prg4Q9JM99 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.67□□□□□ -0.54
Prg4Q9JM99 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm15370-201ENSMUST00000117158 253 ntBASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm14723-201ENSMUST00000118686 215 ntBASIC11.67□□□□□ -0.54
Prg4Q9JM99 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.67□□□□□ -0.54
Prg4Q9JM99 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 Gm10608-202ENSMUST00000213924 676 ntBASIC11.67□□□□□ -0.54
Prg4Q9JM99 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prg4Q9JM99 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.67□□□□□ -0.54
Prg4Q9JM99 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.67□□□□□ -0.54
Prg4Q9JM99 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms