Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Gm13813-201ENSMUST00000120998 787 ntBASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn5Q9JL35 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gm26464-201ENSMUST00000157094 305 ntBASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gm8000-201ENSMUST00000188378 592 ntBASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn5Q9JL35 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Mir686-201ENSMUST00000102174 109 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm43094-201ENSMUST00000196549 921 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Gm5312-201ENSMUST00000203728 547 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn5Q9JL35 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms