Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trem1Q9JKE2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Gm44124-201ENSMUST00000204159 472 ntBASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trem1Q9JKE2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 AA543401-201ENSMUST00000164248 1269 ntBASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Gm18027-201ENSMUST00000218947 619 ntBASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trem1Q9JKE2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms