Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.63□□□□□ -0.39
OtofQ9ESF1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.63□□□□□ -0.39
OtofQ9ESF1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
OtofQ9ESF1 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.62□□□□□ -0.39
OtofQ9ESF1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.62□□□□□ -0.39
OtofQ9ESF1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.62□□□□□ -0.39
OtofQ9ESF1 Gm44958-201ENSMUST00000203734 736 ntBASIC12.62□□□□□ -0.39
OtofQ9ESF1 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.62□□□□□ -0.39
OtofQ9ESF1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
OtofQ9ESF1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.62□□□□□ -0.39
OtofQ9ESF1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
OtofQ9ESF1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Rmrp-201ENSMUST00000157463 271 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Gm18734-201ENSMUST00000172937 808 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 Mir5120-201ENSMUST00000175020 78 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 Gm28450-201ENSMUST00000187349 638 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Gm14999-201ENSMUST00000121039 624 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 Gm14017-201ENSMUST00000121934 386 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.61□□□□□ -0.39
OtofQ9ESF1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
OtofQ9ESF1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms