Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim54Q9ERP3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm24830-201ENSMUST00000102024 166 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm26461-201ENSMUST00000175064 290 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm25890-201ENSMUST00000177643 165 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm22614-201ENSMUST00000178300 165 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm22042-201ENSMUST00000082989 165 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm26232-201ENSMUST00000083360 166 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm26110-201ENSMUST00000083971 165 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.86□□□□□ -0.19
Trim54Q9ERP3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim54Q9ERP3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gm13492-201ENSMUST00000119772 665 ntBASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.85□□□□□ -0.19
Trim54Q9ERP3 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.85□□□□□ -0.19
Trim54Q9ERP3 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim54Q9ERP3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms