Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm23400-201ENSMUST00000174994 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm26463-201ENSMUST00000175065 101 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm24332-201ENSMUST00000175102 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm25959-201ENSMUST00000175112 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm22475-201ENSMUST00000175169 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm22903-201ENSMUST00000175193 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm25070-201ENSMUST00000175237 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm24159-201ENSMUST00000175264 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm25299-201ENSMUST00000175283 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm23798-201ENSMUST00000175560 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm23802-201ENSMUST00000175565 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm25708-201ENSMUST00000177687 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm24370-201ENSMUST00000178007 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm23049-201ENSMUST00000178068 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm28019-201ENSMUST00000178138 101 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm25571-201ENSMUST00000178322 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm25355-201ENSMUST00000178456 101 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm24975-201ENSMUST00000178492 101 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm23189-201ENSMUST00000178954 102 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm25100-201ENSMUST00000179750 101 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm23064-201ENSMUST00000179866 101 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scn4aQ9ER60 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.3
Scn4aQ9ER60 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Scn4aQ9ER60 Gm25226-201ENSMUST00000158198 123 ntBASIC16.96■□□□□ 0.3
Scn4aQ9ER60 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Scn4aQ9ER60 Gm37638-201ENSMUST00000194337 1123 ntBASIC16.96■□□□□ 0.3
Scn4aQ9ER60 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC16.96■□□□□ 0.3
Scn4aQ9ER60 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scn4aQ9ER60 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Scn4aQ9ER60 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Gm24231-201ENSMUST00000104315 133 ntBASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Gm13445-201ENSMUST00000121664 307 ntBASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Gm43380-201ENSMUST00000200421 220 ntBASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.95■□□□□ 0.3
Scn4aQ9ER60 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn4aQ9ER60 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Gm11996-201ENSMUST00000117538 915 ntBASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Gm7150-201ENSMUST00000122032 981 ntBASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn4aQ9ER60 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Gm14234-201ENSMUST00000119539 845 ntBASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Gm24078-201ENSMUST00000158184 103 ntBASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Gm19015-201ENSMUST00000184002 1189 ntBASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Gm38007-201ENSMUST00000192187 313 ntBASIC16.93■□□□□ 0.3
Scn4aQ9ER60 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4aQ9ER60 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms