Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gm38144-201ENSMUST00000192790 465 ntBASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gm24447-201ENSMUST00000083977 338 ntBASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn3Q9DCB1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Gm15240-201ENSMUST00000118156 720 ntBASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Gm15653-201ENSMUST00000119247 907 ntBASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Gm37015-201ENSMUST00000192763 1521 ntBASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn3Q9DCB1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn3Q9DCB1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn3Q9DCB1 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.99□□□□□ -0.49
Hmgn3Q9DCB1 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn3Q9DCB1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn3Q9DCB1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn3Q9DCB1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn3Q9DCB1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn3Q9DCB1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms