Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm10012-201ENSMUST00000078252 192 ntBASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gtf3c6Q9D8P7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Gm13123-201ENSMUST00000122173 492 ntBASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Gm6244-201ENSMUST00000178732 841 ntBASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Gm24196-201ENSMUST00000179161 110 ntBASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Gm37922-201ENSMUST00000195596 455 ntBASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gtf3c6Q9D8P7 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Gm11803-201ENSMUST00000119966 444 ntBASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Gm13813-201ENSMUST00000120998 787 ntBASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Gm9002-201ENSMUST00000178437 499 ntBASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gtf3c6Q9D8P7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms