Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
U2af1Q9D883 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
U2af1Q9D883 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
U2af1Q9D883 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.82■□□□□ 0.28
U2af1Q9D883 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
U2af1Q9D883 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
U2af1Q9D883 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.82■□□□□ 0.28
U2af1Q9D883 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.81■□□□□ 0.28
U2af1Q9D883 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.81■□□□□ 0.28
U2af1Q9D883 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.81■□□□□ 0.28
U2af1Q9D883 Gm13342-201ENSMUST00000121055 207 ntBASIC16.81■□□□□ 0.28
U2af1Q9D883 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.81■□□□□ 0.28
U2af1Q9D883 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Gm6621-201ENSMUST00000193251 772 ntBASIC16.81■□□□□ 0.28
U2af1Q9D883 Gm43822-201ENSMUST00000200285 476 ntBASIC16.81■□□□□ 0.28
U2af1Q9D883 Gm45865-201ENSMUST00000211815 945 ntBASIC16.81■□□□□ 0.28
U2af1Q9D883 Morn2-202ENSMUST00000227729 656 ntBASIC16.81■□□□□ 0.28
U2af1Q9D883 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.81■□□□□ 0.28
U2af1Q9D883 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.81■□□□□ 0.28
U2af1Q9D883 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.81■□□□□ 0.28
U2af1Q9D883 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
U2af1Q9D883 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
U2af1Q9D883 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
U2af1Q9D883 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.8■□□□□ 0.28
U2af1Q9D883 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
U2af1Q9D883 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Gm2991-201ENSMUST00000173338 480 ntBASIC16.8■□□□□ 0.28
U2af1Q9D883 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.8■□□□□ 0.28
U2af1Q9D883 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
U2af1Q9D883 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.8■□□□□ 0.28
U2af1Q9D883 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
U2af1Q9D883 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2af1Q9D883 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2af1Q9D883 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2af1Q9D883 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2af1Q9D883 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2af1Q9D883 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2af1Q9D883 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
U2af1Q9D883 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2af1Q9D883 Gm10434-201ENSMUST00000101158 471 ntBASIC16.79■□□□□ 0.28
U2af1Q9D883 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms