Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gm14017-201ENSMUST00000121934 386 ntBASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gm16296-201ENSMUST00000159905 325 ntBASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Mir5132-201ENSMUST00000175166 71 ntBASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gm16505-201ENSMUST00000179981 232 ntBASIC15.25■□□□□ 0.03
Stag1Q9D3E6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gm27046-201ENSMUST00000182160 463 ntBASIC15.25■□□□□ 0.03
Stag1Q9D3E6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.25■□□□□ 0.03
Stag1Q9D3E6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Stag1Q9D3E6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Gm3096-201ENSMUST00000185770 364 ntBASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.24■□□□□ 0.03
Stag1Q9D3E6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Gm8885-201ENSMUST00000189382 598 ntBASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Gm8712-201ENSMUST00000221090 701 ntBASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms