Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm14822-201ENSMUST00000122247 291 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm3436-201ENSMUST00000179930 840 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm27622-201ENSMUST00000183779 60 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm27533-201ENSMUST00000183800 152 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm43474-201ENSMUST00000196415 774 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm24447-201ENSMUST00000083977 338 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Gm25144-201ENSMUST00000179561 110 ntBASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Gm25352-201ENSMUST00000179815 110 ntBASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Gm27702-201ENSMUST00000184512 56 ntBASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim42Q9D2H5 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms