Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chaf1bQ9D0N7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chaf1bQ9D0N7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Gm6447-201ENSMUST00000118905 835 ntBASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Gm9063-201ENSMUST00000223299 582 ntBASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.02□□□□□ -0.49
Chaf1bQ9D0N7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Gm13223-201ENSMUST00000118609 747 ntBASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Gm2756-201ENSMUST00000195851 400 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms