Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Daam2-202ENSMUST00000224595 1926 ntBASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Gm6447-201ENSMUST00000118905 835 ntBASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Gm27321-201ENSMUST00000185021 205 ntBASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hdhd3Q9CYW4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hdhd3Q9CYW4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Hdhd3Q9CYW4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hdhd3Q9CYW4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hdhd3Q9CYW4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Hdhd3Q9CYW4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm14767-201ENSMUST00000121559 586 ntBASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm15376-201ENSMUST00000122258 783 ntBASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm17837-201ENSMUST00000186435 985 ntBASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm38144-201ENSMUST00000192790 465 ntBASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Chchd1-203ENSMUST00000224633 557 ntBASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hdhd3Q9CYW4 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms