Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Gm14701-201ENSMUST00000117156 348 ntBASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Gm27838-201ENSMUST00000184829 128 ntBASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Gm28760-201ENSMUST00000185995 736 ntBASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Gm28693-202ENSMUST00000190758 331 ntBASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssu72Q9CY97 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm22189-201ENSMUST00000103822 86 ntBASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm24694-201ENSMUST00000180054 110 ntBASIC12.68□□□□□ -0.38
Ssu72Q9CY97 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm27663-201ENSMUST00000184839 110 ntBASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm2213-201ENSMUST00000197485 688 ntBASIC12.68□□□□□ -0.38
Ssu72Q9CY97 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm6983-201ENSMUST00000214912 628 ntBASIC12.68□□□□□ -0.38
Ssu72Q9CY97 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssu72Q9CY97 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms