Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx47Q9CWX9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Gm26035-201ENSMUST00000083065 308 ntBASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx47Q9CWX9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx47Q9CWX9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx47Q9CWX9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm11978-201ENSMUST00000122315 466 ntBASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm8396-201ENSMUST00000057361 823 ntBASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx47Q9CWX9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx47Q9CWX9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms