Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Gm11814-201ENSMUST00000119515 929 ntBASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Gm6152-201ENSMUST00000151704 340 ntBASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.34□□□□□ -0.27
Rnf135Q9CWS1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf135Q9CWS1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf135Q9CWS1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf135Q9CWS1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Rnf135Q9CWS1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Rnf135Q9CWS1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf135Q9CWS1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf135Q9CWS1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.33□□□□□ -0.27
Rnf135Q9CWS1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Gm12928-201ENSMUST00000117115 573 ntBASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Snora78-201ENSMUST00000158630 128 ntBASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Gm8463-201ENSMUST00000208573 613 ntBASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Gm6458-201ENSMUST00000211573 635 ntBASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf135Q9CWS1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm8062-201ENSMUST00000139696 444 ntBASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm17420-201ENSMUST00000164753 153 ntBASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm27847-201ENSMUST00000183711 107 ntBASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm27375-201ENSMUST00000183799 107 ntBASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm7287-201ENSMUST00000205267 602 ntBASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.32□□□□□ -0.28
Rnf135Q9CWS1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms