Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm14921-201ENSMUST00000118643 908 ntBASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Gm14704-201ENSMUST00000120300 874 ntBASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Gm11637-201ENSMUST00000120601 592 ntBASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Gm9002-201ENSMUST00000178437 499 ntBASIC14.59□□□□□ -0.07
Trim11Q99PQ2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Mir339-201ENSMUST00000083659 96 ntBASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.59□□□□□ -0.07
Trim11Q99PQ2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim11Q99PQ2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trim11Q99PQ2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trim11Q99PQ2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim11Q99PQ2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm12203-201ENSMUST00000118235 598 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm12209-201ENSMUST00000120089 596 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm16479-201ENSMUST00000121706 932 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm2231-201ENSMUST00000125661 612 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm24196-201ENSMUST00000179161 110 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm27892-201ENSMUST00000185017 106 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm37497-201ENSMUST00000195830 798 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gm10012-201ENSMUST00000078252 192 ntBASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim11Q99PQ2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Gm11814-201ENSMUST00000119515 929 ntBASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Gm12138-201ENSMUST00000122180 951 ntBASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Gm26185-201ENSMUST00000157692 266 ntBASIC14.57□□□□□ -0.08
Trim11Q99PQ2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms