Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm12579-201ENSMUST00000118040 783 ntBASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm9166-201ENSMUST00000120293 561 ntBASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm12164-201ENSMUST00000121695 551 ntBASIC12.67□□□□□ -0.38
Cdh23Q99PF4 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.67□□□□□ -0.38
Cdh23Q99PF4 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm12857-201ENSMUST00000117678 592 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm8737-201ENSMUST00000122208 642 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm42433-201ENSMUST00000196806 940 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm5298-201ENSMUST00000201122 892 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm14921-201ENSMUST00000118643 908 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh23Q99PF4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.65□□□□□ -0.38
Cdh23Q99PF4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.65□□□□□ -0.38
Cdh23Q99PF4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdh23Q99PF4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh23Q99PF4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh23Q99PF4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh23Q99PF4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh23Q99PF4 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.65□□□□□ -0.39
Cdh23Q99PF4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh23Q99PF4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms