Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Gm15131-201ENSMUST00000119124 595 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Gm44126-201ENSMUST00000204831 514 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Gm25007-201ENSMUST00000083808 133 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Rubie-203ENSMUST00000227803 2430 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm8566-201ENSMUST00000120174 465 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm13813-201ENSMUST00000120998 787 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm19459-201ENSMUST00000176240 835 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm5070-201ENSMUST00000177599 862 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-1Q99MA9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Gm17812-201ENSMUST00000204935 318 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms