Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm8213-201ENSMUST00000118191 441 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm12291-201ENSMUST00000121627 311 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gm8598-201ENSMUST00000221184 836 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cstf3Q99LI7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Paupar-201ENSMUST00000194826 3482 ntBASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.37□□□□□ -0.43
Cstf3Q99LI7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Gm6180-201ENSMUST00000065243 498 ntBASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cstf3Q99LI7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms