Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Gm11814-201ENSMUST00000119515 929 ntBASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Gm5687-201ENSMUST00000118252 640 ntBASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Gm17150-201ENSMUST00000165577 381 ntBASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vmp1Q99KU0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.37□□□□□ -0.43
Vmp1Q99KU0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Gm15824-201ENSMUST00000119516 955 ntBASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms