Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.91□□□□□ -0.34
Cdk9Q99J95 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Gm27321-201ENSMUST00000185021 205 ntBASIC12.91□□□□□ -0.34
Cdk9Q99J95 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Gm7775-201ENSMUST00000218871 853 ntBASIC12.91□□□□□ -0.34
Cdk9Q99J95 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.91□□□□□ -0.34
Cdk9Q99J95 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk9Q99J95 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.9□□□□□ -0.34
Cdk9Q99J95 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk9Q99J95 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Cdk9Q99J95 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.9□□□□□ -0.35
Cdk9Q99J95 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.9□□□□□ -0.35
Cdk9Q99J95 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.9□□□□□ -0.35
Cdk9Q99J95 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms