Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdha3Q91Y16 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdha3Q91Y16 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha3Q91Y16 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdha3Q91Y16 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha3Q91Y16 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Gm27682-201ENSMUST00000183930 110 ntBASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha3Q91Y16 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Gm8805-201ENSMUST00000117848 313 ntBASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Gm16479-201ENSMUST00000121706 932 ntBASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Gm5370-201ENSMUST00000187187 574 ntBASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha3Q91Y16 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdha3Q91Y16 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha3Q91Y16 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms