Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
Pcdhb22Q91XZ8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdhb22Q91XZ8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdhb22Q91XZ8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gm12957-201ENSMUST00000117835 377 ntBASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gm24548-201ENSMUST00000158650 108 ntBASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 CT009764.1-201ENSMUST00000222260 483 ntBASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Pcdhb22Q91XZ8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Gm19184-201ENSMUST00000196798 928 ntBASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.94□□□□□ -0.02
Pcdhb22Q91XZ8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Gm12742-201ENSMUST00000117326 410 ntBASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Gm14716-201ENSMUST00000120138 718 ntBASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb22Q91XZ8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb22Q91XZ8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms