Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm12585-201ENSMUST00000117307 290 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm15678-201ENSMUST00000117573 960 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm15460-201ENSMUST00000118147 391 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm37714-201ENSMUST00000194742 342 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm43435-201ENSMUST00000199996 1438 ntBASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb3Q91XZ7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Gm5745-201ENSMUST00000183748 313 ntBASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb3Q91XZ7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms