Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm16379-201ENSMUST00000161469 348 ntBASIC14.72□□□□□ -0.05
Ddx41Q91VN6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Gm8762-201ENSMUST00000193486 339 ntBASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.72□□□□□ -0.05
Ddx41Q91VN6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Gm11591-201ENSMUST00000120063 702 ntBASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ddx41Q91VN6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx41Q91VN6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.71□□□□□ -0.06
Ddx41Q91VN6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Ddx41Q91VN6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx41Q91VN6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx41Q91VN6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx41Q91VN6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx41Q91VN6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx41Q91VN6 Matn2-203ENSMUST00000226766 3252 ntBASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Gm9257-201ENSMUST00000221254 232 ntBASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx41Q91VN6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx41Q91VN6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms