Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Tram1Q91V04 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tram1Q91V04 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tram1Q91V04 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tram1Q91V04 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Tram1Q91V04 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.02□□□□□ -0.64
Tram1Q91V04 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tram1Q91V04 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tram1Q91V04 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Tram1Q91V04 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tram1Q91V04 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.02□□□□□ -0.65
Tram1Q91V04 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Tram1Q91V04 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tram1Q91V04 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.02□□□□□ -0.65
Tram1Q91V04 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.02□□□□□ -0.65
Tram1Q91V04 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Gm27622-201ENSMUST00000183779 60 ntBASIC11.02□□□□□ -0.65
Tram1Q91V04 Gm7063-201ENSMUST00000186840 981 ntBASIC11.02□□□□□ -0.65
Tram1Q91V04 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.02□□□□□ -0.65
Tram1Q91V04 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.02□□□□□ -0.65
Tram1Q91V04 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Tram1Q91V04 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Tram1Q91V04 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Tram1Q91V04 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tram1Q91V04 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tram1Q91V04 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.01□□□□□ -0.65
Tram1Q91V04 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Tram1Q91V04 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tram1Q91V04 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms