Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gm28693-202ENSMUST00000190758 331 ntBASIC13.24□□□□□ -0.29
Trim60Q8VI40 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Gm14921-201ENSMUST00000118643 908 ntBASIC13.23□□□□□ -0.29
Trim60Q8VI40 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.23□□□□□ -0.29
Trim60Q8VI40 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.23□□□□□ -0.29
Trim60Q8VI40 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim60Q8VI40 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Gm9630-201ENSMUST00000178304 885 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 Gm44124-201ENSMUST00000204159 472 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms