Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Gm2231-201ENSMUST00000125661 612 ntBASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Gm38002-201ENSMUST00000193255 180 ntBASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Gm19309-201ENSMUST00000218295 205 ntBASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gm16479-201ENSMUST00000121706 932 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gm25927-201ENSMUST00000175058 117 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gm43179-201ENSMUST00000198797 275 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Snora73a-201ENSMUST00000082453 205 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg1dQ8VE91 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retreg1dQ8VE91 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms