Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Gm25261-201ENSMUST00000157416 134 ntBASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpap2Q8VC34 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Gm18584-201ENSMUST00000203098 964 ntBASIC14.03□□□□□ -0.16
Rpap2Q8VC34 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpap2Q8VC34 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpap2Q8VC34 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gm16379-201ENSMUST00000161469 348 ntBASIC14.02□□□□□ -0.17
Rpap2Q8VC34 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gm6222-202ENSMUST00000182143 629 ntBASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gm8762-201ENSMUST00000193486 339 ntBASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms