Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gm21854-201ENSMUST00000179901 471 ntBASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gm26035-201ENSMUST00000083065 308 ntBASIC10.43□□□□□ -0.74
Nup35Q8R4R6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup35Q8R4R6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Rubie-203ENSMUST00000227803 2430 ntBASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Gm2756-201ENSMUST00000195851 400 ntBASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Nup35Q8R4R6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms