Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm10146-201ENSMUST00000072739 309 ntBASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Gm27331-201ENSMUST00000183705 60 ntBASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Gm18187-201ENSMUST00000196476 984 ntBASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim29Q8R2Q0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Gm14704-201ENSMUST00000120300 874 ntBASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Gm17208-201ENSMUST00000168388 535 ntBASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Gm4271-201ENSMUST00000174444 973 ntBASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Gm8099-201ENSMUST00000200510 742 ntBASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim29Q8R2Q0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms