Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gm11989-201ENSMUST00000117240 672 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gm11362-201ENSMUST00000118838 850 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gm11246-201ENSMUST00000120880 345 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gm7395-201ENSMUST00000216059 1045 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 AC159376.1-201ENSMUST00000218504 630 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gm21998-201ENSMUST00000117552 1308 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Gm9387-201ENSMUST00000098624 1320 ntBASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ddx54Q8K4L0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm3765-201ENSMUST00000130985 1447 ntBASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm4726-201ENSMUST00000135604 736 ntBASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm6019-201ENSMUST00000148369 736 ntBASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm23218-201ENSMUST00000158124 276 ntBASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm22138-201ENSMUST00000158748 128 ntBASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm43962-201ENSMUST00000203898 190 ntBASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ddx54Q8K4L0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Gm12899-201ENSMUST00000120565 551 ntBASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Mir7076-201ENSMUST00000183519 74 ntBASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC16.63■□□□□ 0.25
Ddx54Q8K4L0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Gm11801-201ENSMUST00000117807 746 ntBASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Gm12314-201ENSMUST00000118104 538 ntBASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Gm807-202ENSMUST00000224929 408 ntBASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx54Q8K4L0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms