Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ebf4Q8K4J2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.65□□□□□ -0.55
Ebf4Q8K4J2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ebf4Q8K4J2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gm12585-201ENSMUST00000117307 290 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gm46209-201ENSMUST00000217912 553 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gm26035-201ENSMUST00000083065 308 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.64□□□□□ -0.55
Ebf4Q8K4J2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm6736-201ENSMUST00000166583 948 ntBASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm28630-201ENSMUST00000187806 498 ntBASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm43575-201ENSMUST00000196420 516 ntBASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm35960-201ENSMUST00000202712 767 ntBASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms