Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cnot3Q8K0V4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Gm6447-201ENSMUST00000118905 835 ntBASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Gm27618-201ENSMUST00000183671 60 ntBASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Gm17837-201ENSMUST00000186435 985 ntBASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Gm42550-201ENSMUST00000201553 960 ntBASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.01□□□□□ -0.49
Cnot3Q8K0V4 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12□□□□□ -0.49
Cnot3Q8K0V4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Gm37277-201ENSMUST00000194052 1111 ntBASIC12□□□□□ -0.49
Cnot3Q8K0V4 AW822252-206ENSMUST00000208904 237 ntBASIC12□□□□□ -0.49
Cnot3Q8K0V4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Chchd1-203ENSMUST00000224633 557 ntBASIC12□□□□□ -0.49
Cnot3Q8K0V4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12□□□□□ -0.49
Cnot3Q8K0V4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Cog3-203ENSMUST00000227473 4197 ntBASIC12□□□□□ -0.49
Cnot3Q8K0V4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Nupl1-206ENSMUST00000225111 2936 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms