Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Mir686-201ENSMUST00000102174 109 ntBASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gm12384-201ENSMUST00000119228 919 ntBASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gm16479-201ENSMUST00000121706 932 ntBASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gm45784-201ENSMUST00000188360 142 ntBASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gm25857-201ENSMUST00000082788 129 ntBASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gm14660-201ENSMUST00000119809 575 ntBASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfwd3Q8CIK8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms