Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab43Q8CG50 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab43Q8CG50 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Rab43Q8CG50 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm14109-201ENSMUST00000118814 309 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 AA914427-201ENSMUST00000193194 1166 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm43138-201ENSMUST00000199123 708 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm45186-201ENSMUST00000206874 478 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.5□□□□□ -0.41
Rab43Q8CG50 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab43Q8CG50 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Rab43Q8CG50 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.49□□□□□ -0.41
Rab43Q8CG50 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.49□□□□□ -0.41
Rab43Q8CG50 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.49□□□□□ -0.41
Rab43Q8CG50 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm14277-201ENSMUST00000121195 360 ntBASIC12.49□□□□□ -0.41
Rab43Q8CG50 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm37201-201ENSMUST00000191845 523 ntBASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.49□□□□□ -0.41
Rab43Q8CG50 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rab43Q8CG50 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab43Q8CG50 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab43Q8CG50 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab43Q8CG50 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rab43Q8CG50 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab43Q8CG50 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab43Q8CG50 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab43Q8CG50 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rab43Q8CG50 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms