Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.8■□□□□ 0.12
Smc5Q8CG46 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.8■□□□□ 0.12
Smc5Q8CG46 Gm13612-201ENSMUST00000119276 390 ntBASIC15.8■□□□□ 0.12
Smc5Q8CG46 Gm14057-201ENSMUST00000120631 482 ntBASIC15.8■□□□□ 0.12
Smc5Q8CG46 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.8■□□□□ 0.12
Smc5Q8CG46 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.8■□□□□ 0.12
Smc5Q8CG46 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.8■□□□□ 0.12
Smc5Q8CG46 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smc5Q8CG46 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc5Q8CG46 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.79■□□□□ 0.12
Smc5Q8CG46 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Gm10156-201ENSMUST00000122364 462 ntBASIC15.79■□□□□ 0.12
Smc5Q8CG46 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Gm16296-201ENSMUST00000159905 325 ntBASIC15.79■□□□□ 0.12
Smc5Q8CG46 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.79■□□□□ 0.12
Smc5Q8CG46 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.79■□□□□ 0.12
Smc5Q8CG46 Gm45668-201ENSMUST00000211271 493 ntBASIC15.79■□□□□ 0.12
Smc5Q8CG46 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.79■□□□□ 0.12
Smc5Q8CG46 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc5Q8CG46 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.78■□□□□ 0.12
Smc5Q8CG46 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.78■□□□□ 0.12
Smc5Q8CG46 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.78■□□□□ 0.12
Smc5Q8CG46 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.78■□□□□ 0.12
Smc5Q8CG46 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Gm2423-201ENSMUST00000074863 733 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms